The detailed information of tRNA gene sequence


Sequence ID>SRA1001223
Genome IDSRR001054.64840
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 53
End posion on genome 129
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaaatatat
tRNA gene sequence 
GTCCCCATCGTCTAGTCAGGTCTAGGACACTACCCTTTCACGGTAGCGACACGGGTTCAA
ATCCCGTTGGGGATACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001223	Glu	TTC
                   t      ACCn nnnnnnnnnn
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
    C T G A        C      | | | | |     A
  A         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     CGAC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK