The detailed information of tRNA gene sequence


Sequence ID>SRA1001224
Genome IDSRR001055.9912
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 31
End posion on genome 107
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gatgtgtaac
tRNA gene sequence 
AGCCCGATAGTTCAACCGGATAGAACAACGGCCTTCTAAGCCGTAGGTTGCAGGTTCGAG
TCCTGCTCGGGGCGCCA
Downstream region at tRNA end position 
acnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001224	Arg	TCT
                   c      GCCA acnnnnnnnn
                     A   C
                     G   G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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