The detailed information of tRNA gene sequence


Sequence ID>SRA1001225
Genome IDSRR001055.11739
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 77
End posion on genome 2
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attaaatatt
tRNA gene sequence 
GCGCTCGTGGCCAAACGGATAAGGCAACAGACTTCTAATCTGTAGACTGCAGGTTCGATT
CCTGCCGAGCGCGCCA
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001225	Arg	TCT
                   t      GCCA cnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G T C C     A
      C A A        G      | | | | |     G
    G       A C C G       G C A G G     C
    G         | | |                 T T
    A       A G G C
      T A          A     AGACT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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