The detailed information of tRNA gene sequence


Sequence ID>SRA1001226
Genome IDSRR001056.4361
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 89
End posion on genome 14
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agatcaccaa
tRNA gene sequence 
TGACCGATAGTTCAGTCGGTAGAACGGGTGACTGTTAATCACTATGTCGCAGGTTCGAGT
CCTGCTCGGGCAGCCA
Downstream region at tRNA end position 
catccggtgt
Secondary structure (Cloverleaf model)
>SRA1001226	Asn	GTT
                   a      GCCA catccggtgt
                     T - A
                     G - C
                     A   G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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