The detailed information of tRNA gene sequence


Sequence ID>SRA1001228
Genome IDSRR001056.7216
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 77
End posion on genome 4
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cttaaccttt
tRNA gene sequence 
GCTTCTGTAGTTTAGTTGGTAAATAACTGACTTGTAATCAGTAGTCATCGGTTCGAACCC
GGTCAGAAGCTCAA
Downstream region at tRNA end position 
actnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001228	Thr	TGT
                   t      TCAA actnnnnnnn
                     G - C
                     C - G
                     T - A
                     T - A
                     C - G
                     T - A
                     G - C          C A
                    T     T G G C C     A
        G A        A      | + | | |     G
      T     T T T G       A T C G G     C
      T     | | | +                 T T
      G     A A A T
        G T        A     AGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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