The detailed information of tRNA gene sequence


Sequence ID>SRA1001231
Genome IDSRR001056.12861
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 73
End posion on genome -1
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcacctcata
tRNA gene sequence 
GCGCCTATAGCTCAATTGGATAGAGCTACAGCCTTCTAAGCTGTAGGTTGCAGGTTCGAG
TCCTGCTGGGCGCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001231	Arg	TCT
                   a      NNnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        T     AGGTT
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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