The detailed information of tRNA gene sequence


Sequence ID>SRA1001243
Genome IDSRR001057.13154
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147)
Species
Start position on genome 91
End posion on genome 17
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctatcggtag
tRNA gene sequence 
GCTCCGTTGGTGTAGTCCGGCCAATCATATTGCCCTCTCACGGCAATGACCAGGGTTCAA
ATCCCTGACGGAGCAtct
Downstream region at tRNA end position 
gtgtttgtgt
Secondary structure (Cloverleaf model)
>SRA1001243	Glu	CTC
                   g      Atct gtgtttgtgt
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C A G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        A     TGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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