The detailed information of tRNA gene sequence


Sequence ID>SRA1001247
Genome IDSRR001058.10846
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147)
Species
Start position on genome 93
End posion on genome 18
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
ctgcagccga
tRNA gene sequence 
GGGCCCGTAGCTCAGTGGACAGAGTCCCTGGTTCCGGACCAGGATGTCGCGGGTTCAAAT
CCCGTCGGGTCCGTCA
Downstream region at tRNA end position 
ttcctcggaa
Secondary structure (Cloverleaf model)
>SRA1001247	Arg	CCG
                   a      GTCA ttcctcggaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       C T C G       G C G G G     C
    G       | | | +                 T T
    A       G A G T
      C A          C     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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