The detailed information of tRNA gene sequence


Sequence ID>SRA1001258
Genome IDSRR001060.9168
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 34
End posion on genome 106
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gatgccagtg
tRNA gene sequence 
TCCGGGTTGGGGTAGTGGTTATCCTTCAGCCTTGTGGAGGCTGAGACGCGGGTTCAATTC
TCGCACCCGGACCtc
Downstream region at tRNA end position 
ccnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001258	His	GTG
                   g      CCtc ccnnnnnnnn
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    T     C G C T C     A
      T G A        G      | | | + |     A
    G       T G G G       G C G G G     C
    G         | | +                 T T
    T       T C C T
      T A          T     AGAC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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