The detailed information of tRNA gene sequence


Sequence ID>SRA1001263
Genome IDSRR001060.16068
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 92
End posion on genome 8
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnggatgtac
tRNA gene sequence 
GCAGGGATGGCCAAGTCTGGTCAACGGCGCAGCGTTCAGGGCGCTGTCCCATAGGGGTCC
GCAGGTTCAAATCCTGCTCCCTGCAgtc
Downstream region at tRNA end position 
cgcgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001263	Leu	CAG
                   c      Agtc cgcgnnnnnn
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G T C C     A
    C T G A        G      | | | | |     A
  T         A C C G       G C A G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCCCATAGGGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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