The detailed information of tRNA gene sequence


Sequence ID>SRA1001270
Genome IDSRR001062.83032
Search identical group
Phylum/ClassStromatolites, microbial fraction from Highborne Cay microbiolite in the Bahamas (SRP000150)
Species
Start position on genome 105
End posion on genome 31
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnntatg
tRNA gene sequence 
GCAGGCGTAGTGTAAAGGTAGCACGACTGGCTGTGGCCCAGTAAGAGGTGAGTTCAATTC
TCCCCGTTTGCCCCA
Downstream region at tRNA end position 
gttcaagtag
Secondary structure (Cloverleaf model)
>SRA1001270	His	GTG
                   g      CCCA gttcaagtag
                     G - C
                     C - G
                     A - T
                     G + T
                     G + T
                     C - G
                     G - C          T T
                    T     C C C T C     A
        A A        A      |   | | |     A
      A     T G T G       G T G A G     C
      G     + | | |                 T T
      G     G C A C
        T A        G     AAGAG
                    A - T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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