The detailed information of tRNA gene sequence


Sequence ID>SRA1001275
Genome IDSRR001062.123912
Search identical group
Phylum/ClassStromatolites, microbial fraction from Highborne Cay microbiolite in the Bahamas (SRP000150)
Species
Start position on genome 3
End posion on genome 78
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
nnnnnnnntt
tRNA gene sequence 
TGGGGTGTAGCTCAGAGGACAGAGCAGTGGTCTACGAAGCCATGTGCCGGGGGTTCGACT
CCCTCCATCCCAGCTA
Downstream region at tRNA end position 
ggtgaatgcg
Secondary structure (Cloverleaf model)
>SRA1001275	Arg	ACG
                   t      GCTA ggtgaatgcg
                     T - A
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     G - C          T C
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C A          A     GTGCC
                    G + T
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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