The detailed information of tRNA gene sequence


Sequence ID>SRA1001277
Genome IDSRR001062.153057
Search identical group
Phylum/ClassStromatolites, microbial fraction from Highborne Cay microbiolite in the Bahamas (SRP000150)
Species
Start position on genome 6
End posion on genome 82
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnngtttt
tRNA gene sequence 
CCGGGTTTAGCTCAGTCTGGTAGAGCGATGCGTTTGGGGCGCATAAGTCGCAAGTTCGAA
TCCTGCAACCCGGACCA
Downstream region at tRNA end position 
aaacggacct
Secondary structure (Cloverleaf model)
>SRA1001277	Pro	TGG
                   t      ACCA aaacggacct
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     T - A          T A
                    T     C G T C C     A
      T G A        A      | | |   |     G
    C       C T C G       G C A A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    A - T
                    T - A
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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