The detailed information of tRNA gene sequence


Sequence ID>SRA1001293
Genome IDSRR001063.12790
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 82
End posion on genome -1
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attgcaaggc
tRNA gene sequence 
GGGCCAGTGGCGGAAACGGTTATACGCGCACGACTTAAAATCGTGTCCCGAAAGGGGTGT
GGGTTCGATTCCCACCTGCCCTNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001293	Leu	TAA
                   c      NNnn nnnnnnnnnn
                     G + T
                     G - C
                     G - C
                     C   C
                     C - G
                     A - T
                     G - C          T T
                    T     C A C C C     A
    C A A A        G      | | | | |     G
  G         G G C G       G T G G G     C
  G           | | |                 T T
  T         A C G C
    T A T          G     TCCCGAAAGGGGT
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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