The detailed information of tRNA gene sequence


Sequence ID>SRA1001302
Genome IDSRR001063.56961
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 7
End posion on genome 96
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnngatccc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCACGCGCCTGGAGAGCGCGTGTACCGGAAACGGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gccccgtccg
Secondary structure (Cloverleaf model)
>SRA1001302	Ser	GGA
                   c      GCCA gccccgtccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGTACCGGAAACGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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