The detailed information of tRNA gene sequence


Sequence ID>SRA1001305
Genome IDSRR001063.70885
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 107
End posion on genome 33
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nntaagaaga
tRNA gene sequence 
GGGCCGGTGGTTTAGTGGTATAATGCCGCGTTCGCAACGCGGAAGTCGAGGGTTCAATTC
CCTCCCGGTCCATCA
Downstream region at tRNA end position 
ctagaaacta
Secondary structure (Cloverleaf model)
>SRA1001305	Ala	CGC
                   a      ATCA ctagaaacta
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T T
                    T     C T C C C     A
        G A        G      | | | | |     A
      T     T T T G       G A G G G     C
      G       | | +                 T T
      G     T A A T
        T A        G     AAGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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