The detailed information of tRNA gene sequence


Sequence ID>SRA1001308
Genome IDSRR001063.87494
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaataaatat
tRNA gene sequence 
TGGGGCGTAGCTCAGTTTGGTAGAGTGCTTGGTTTGGGACCAAGATGCCGCGGGTTCAAG
TCCTGTCGCCCCAACCA
Downstream region at tRNA end position 
atatggatag
Secondary structure (Cloverleaf model)
>SRA1001308	Pro	TGG
                   t      ACCA atatggatag
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | + | |     A
    T       C T C G       G C G G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        G     ATGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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