The detailed information of tRNA gene sequence


Sequence ID>SRA1001316
Genome IDSRR001063.112375
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 6
End posion on genome 79
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
nnnncgttgT
tRNA gene sequence 
TGGGGCGTAGCCAAGCGGTAAGGCAGCGGGTTTTGGTTCCGCCATTCCTAGGTTCGAATC
CTAGCGCCCCCAGtt
Downstream region at tRNA end position 
tttaggtttt
Secondary structure (Cloverleaf model)
>SRA1001316	Gln	TTG
                   T      AGtt tttaggtttt
                     T   C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      C     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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