The detailed information of tRNA gene sequence


Sequence ID>SRA1001325
Genome IDSRR001063.143470
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 79
End posion on genome 5
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
aattgagatg
tRNA gene sequence 
GTGACCGTAGCTCAGTGGTAGAGCCCCGGATTGTGGTTCCGGTTGTCGCGGGTTCGATCC
CCGTCGGTCACCCCA
Downstream region at tRNA end position 
ttttnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001325	His	GTG
                   g      CCCA ttttnnnnnn
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        C     TTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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