The detailed information of tRNA gene sequence


Sequence ID>SRA1001326
Genome IDSRR001063.145933
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 82
End posion on genome 9
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gcttattcgt
tRNA gene sequence 
GGGCCTGTAGCTCAGCTGGGAGAGCGCTACAATCGCACTGTAGAGGCCAGGAGTTCGAAT
CTCCTCAGGTCCACtg
Downstream region at tRNA end position 
tttacannnn
Secondary structure (Cloverleaf model)
>SRA1001326	Ala	CGC
                   t      ACtg tttacannnn
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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