The detailed information of tRNA gene sequence


Sequence ID>SRA1001329
Genome IDSRR001063.165803
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 23
End posion on genome 98
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tccgattttA
tRNA gene sequence 
AGGGGTCTTAGCTCAGTTGGTAGAGCGCCTGAATGGCATTCAGGAGGTCAGGGGTTCGAA
CCCCCTAGCTCCATTtc
Downstream region at tRNA end position 
ccgccgcggg
Secondary structure (Cloverleaf model)
>SRA1001329	Ala	GGC
                   A      TTtc ccgccgcggg
                     A   A
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C   A          C A
                    T     T C C C C     A
      G A C        T      | | | | |     G
    T       T C G A       A G G G G     C
    T       +                       T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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