The detailed information of tRNA gene sequence


Sequence ID>SRA1001330
Genome IDSRR001063.187277
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 2
End posion on genome 77
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
nnnnnnnnnt
tRNA gene sequence 
GCCGGCGTAGCTCAGTTGGTAGAGCAGCGGTTTCGTAAACCGCAGGTCGTCCGTTCAATC
CGGATCGCCGGCTCCA
Downstream region at tRNA end position 
gtgtttcagc
Secondary structure (Cloverleaf model)
>SRA1001330	Thr	CGT
                   t      TCCA gtgtttcagc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T A G G C     A
      T G A        A      + | | | |     A
    T       C T C G       G T C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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