The detailed information of tRNA gene sequence


Sequence ID>SRA1001332
Genome IDSRR001063.197417
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 34
End posion on genome 107
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gtaaaaacaa
tRNA gene sequence 
GGGGTCATAGCTCAGCTGGCTAGAGCGCTACAATGGCATTGTAGAGGTCGTGGGTTCGAC
TCCCACTGGCTCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001332	Ala	GGC
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     C - G
                     A - T          T C
                    T     C A C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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