The detailed information of tRNA gene sequence


Sequence ID>SRA1001334
Genome IDSRR001063.206670
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcgttggtgg
tRNA gene sequence 
TGGGGGCTAGCTCGAGTTGGGAGAGCACTACGTTCGCAACGTAGGGGTCGGGGGTTCAAA
TCCCCTGCCCTCCACCA
Downstream region at tRNA end position 
aaccgcactt
Secondary structure (Cloverleaf model)
>SRA1001334	Ala	CGC
                   g      ACCA aaccgcactt
                     T   C
                     G - C
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     T C C C C     A
      G A G        A      + | | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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