The detailed information of tRNA gene sequence


Sequence ID>SRA1001338
Genome IDSRR001063.223454
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 19
End posion on genome 93
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggacaatgc
tRNA gene sequence 
GCGTCCCTGGTGTAATCGGCAGCACGGCTGGCTCCAACCCAGTTGGTCAGGGTTCAAGTC
CTTGGGGGCGTGCCT
Downstream region at tRNA end position 
ggagtgaacc
Secondary structure (Cloverleaf model)
>SRA1001338	Trp	CCA
                   c      GCCT ggagtgaacc
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     C - G          T G
                    T     G T T C C     A
      T A A        G      | | + | |     A
    C       T G T G       C A G G G     C
    G       + | | |                 T T
    G       G C A C
      C A          G     TGGT
                    G + T
                    C - G
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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