The detailed information of tRNA gene sequence


Sequence ID>SRA1001340
Genome IDSRR001063.227867
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 115
End posion on genome 43
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcaattaata
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGCGGCACGGGTTCGAAT
CCCGTAGGGGACGtat
Downstream region at tRNA end position 
taaaattagg
Secondary structure (Cloverleaf model)
>SRA1001340	Glu	TTC
                   a      Gtat taaaattagg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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