The detailed information of tRNA gene sequence


Sequence ID>SRA1001343
Genome IDSRR001063.233603
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 83
End posion on genome 9
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctcaccccat
tRNA gene sequence 
CGGGACGTGGCGCAGTTTGGTAGCGCGCAGCGTTCGGGACGCTGAGGTCGTGGGTTCAAA
TCCCGCCGTCCCGACtc
Downstream region at tRNA end position 
agaaacnnnn
Secondary structure (Cloverleaf model)
>SRA1001343	Pro	CGG
                   t      ACtc agaaacnnnn
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | + | | |     A
    T       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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