The detailed information of tRNA gene sequence


Sequence ID>SRA1001350
Genome IDSRR001063.264878
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 106
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGCCCATAGCTCAGTTGGTTAGAGCCTCCGGCTCATAACCGGACAGTCCTAGGTTCGAG
TCCTAGTGGGCCCACCA
Downstream region at tRNA end position 
tcctctggat
Secondary structure (Cloverleaf model)
>SRA1001350	Met	CAT
                   c      ACCA tcctctggat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     CAGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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