The detailed information of tRNA gene sequence


Sequence ID>SRA1001351
Genome IDSRR001063.265993
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 103
End posion on genome 26
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
aacgtagagt
tRNA gene sequence
GTCCCTGTCGTCTAGCCTGGTCTAGGACATCGCCCTTTCACGGCGAAAACACGGGTTCGA
ATCCCGTCAGGGACGCCA
Downstream region at tRNA end position
gtcttcgttc
Secondary structure (Cloverleaf model)
>SRA1001351	Glu	TTC
                   t      GCCA gtcttcgttc
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T A        A     AAAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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