The detailed information of tRNA gene sequence


Sequence ID>SRA1001358
Genome IDSRR001063.311770
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 97
End posion on genome 25
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnctatggac
tRNA gene sequence 
TGCGGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCGAGT
CCAGCCCCCGCTAatt
Downstream region at tRNA end position 
cttgataaat
Secondary structure (Cloverleaf model)
>SRA1001358	Met	CAT
                   c      Aatt cttgataaat
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    T       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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