The detailed information of tRNA gene sequence


Sequence ID>SRA1001361
Genome IDSRR001063.326244
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 13
End posion on genome 112
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ggcggtttgc
tRNA gene sequence 
GGAAGTGCTTGTACGCCTGGTGGCGGCCACGGTCTTCAAAACCGTCGGGCCGTACGATAA
CCGTGCGGCCGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
ttttctttgc
Secondary structure (Cloverleaf model)
>SRA1001361	SeC	TCA
                   c      GCCA ttttctttgc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    T     T A C C C     A
      C C G        T      + | | | |     G
    T       C A T G       G T G G G     C
    G           + |                 T T
    G       C G G C
      T G G        C     CGGGCCGTACGATAACCGTGCGGCCG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK