The detailed information of tRNA gene sequence


Sequence ID>SRA1001362
Genome IDSRR001063.326834
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 106
End posion on genome 32
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnncctgt
tRNA gene sequence 
AGGCACGTAGCTCAGTGGTAGAGCACTTGCTTGACATGCAAGTGGTCGGTGGTTCAATTC
CACTCGTGCCTACCA
Downstream region at tRNA end position 
gtttttttat
Secondary structure (Cloverleaf model)
>SRA1001362	Val	GAC
                   t      ACCA gtttttttat
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     T C A C C     A
        G A        A      + | | | |     A
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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