The detailed information of tRNA gene sequence


Sequence ID>SRA1001366
Genome IDSRR001064.11831
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 87
End posion on genome 11
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttacgtgtt
tRNA gene sequence 
CGGGACGTGGCGCAGCCCGGTAGCGCACTTGTATGGGGTGCAAGGGGTCGCTAGTTCGAA
TCTAGTCGTCCCGACGA
Downstream region at tRNA end position 
acaggaaaag
Secondary structure (Cloverleaf model)
>SRA1001366	Pro	GGG
                   t      ACGA acaggaaaag
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A T C     A
      C G A        G      + | | | |     G
    C       C G C G       G C T A G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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