The detailed information of tRNA gene sequence


Sequence ID>SRA1001374
Genome IDSRR001064.43929
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 90
End posion on genome 6
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttatgtaat
tRNA gene sequence 
GCCCGGATGGCGGAATTGGTAGACGCGTTGGTCTCAAACACCAATGGTAGTAATACCGTG
CCGGTTCGATCCCGGCTCCGGGTACat
Downstream region at tRNA end position 
ttcnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001374	Leu	CAA
                   t      ACat ttcnnnnnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          C T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTAGTAATACCGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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