The detailed information of tRNA gene sequence


Sequence ID>SRA1001382
Genome IDSRR001064.56898
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 100
End posion on genome 27
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
taaagaaaaa
tRNA gene sequence 
GCGAGGATAGCTCAGTTGGTAGAGCAGTTGGCTTTTAACTAATTGGTCCTGGGTTCGAGT
CCCAGTCCTCGTACtt
Downstream region at tRNA end position 
cttctttatc
Secondary structure (Cloverleaf model)
>SRA1001382	Lys	TTT
                   a      ACtt cttctttatc
                     G + T
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T          T G
                    T     G A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G + T
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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