The detailed information of tRNA gene sequence


Sequence ID>SRA1001390
Genome IDSRR001064.107054
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 21
End posion on genome 105
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
gggcttctct
tRNA gene sequence 
GGAGGGATTCCCGAGCGGCCAAAGGGATCAGACTGTAAATCTGACGGCACTGCCTTCGAA
GGTTCGAATCCTTCTCCCTCCACCA
Downstream region at tRNA end position 
gtttcgnnnn
Secondary structure (Cloverleaf model)
>SRA1001390	Tyr	GTA
                   t      ACCA gtttcgnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCACTGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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