The detailed information of tRNA gene sequence


Sequence ID>SRA1001395
Genome IDSRR001064.117149
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 109
End posion on genome 34
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccctttttaa
tRNA gene sequence 
ACGGGTGTAGCTCAGCTGGTAGAGTAGTGGTCTCCAAAACCATTGGTCGTGGGTTCGAAC
CCTACCGCCCGTGCAA
Downstream region at tRNA end position 
aaacgtagaa
Secondary structure (Cloverleaf model)
>SRA1001395	Trp	CCA
                   a      GCAA aaacgtagaa
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          C A
                    T     C A T C C     A
      C G A        A      | | + | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK