The detailed information of tRNA gene sequence


Sequence ID>SRA1001400
Genome IDSRR001064.154550
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 13
End posion on genome 90
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accaatatat
tRNA gene sequence 
CGCGGAGTGGAGCAGTGGTAGCTCGTTGGGCTCATAACCCAAAAGGGTTCGTTCGTTCGA
GTCGGGCCTCCGCAACTA
Downstream region at tRNA end position 
aggaaaggct
Secondary structure (Cloverleaf model)
>SRA1001400	Met	CAT
                   t      ACTA aggaaaggct
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G G G C     A
        G A        G      | + + | |     G
      T     C G A G       G T T C G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AAGGGTTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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