The detailed information of tRNA gene sequence


Sequence ID>SRA1001401
Genome IDSRR001064.154590
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 94
End posion on genome 5
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnttatatac
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTTGAAGGCGCTACCCTGGAAAGGTAGTATAGGGGTAACTCTA
TCGAGAGTTCGAATCTCTTCCTCTCTGCCA
Downstream region at tRNA end position 
gaacnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001401	Ser	GGA
                   c      GCCA gaacnnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGTAACTCTATC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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