The detailed information of tRNA gene sequence


Sequence ID>SRA1001410
Genome IDSRR001064.169016
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 109
End posion on genome 26
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnttttatac
tRNA gene sequence 
GGAGGAGTTCCCGAGTGGCCAAAGGGGCAGACTGTAAATCTGTTATCAGTGATTTCGGTG
GTTCGAATCCACCCTCCTCCACCA
Downstream region at tRNA end position 
aaaatgattg
Secondary structure (Cloverleaf model)
>SRA1001410	Tyr	GTA
                   c      ACCA aaaatgattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C C A C C     A
      T G A        T      | | | | |     G
    G       G C C C       G G T G G     C
    G           | |                 T T
    C       A A G G
      C A          G     TATCAGTGATTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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