The detailed information of tRNA gene sequence


Sequence ID>SRA1001414
Genome IDSRR001064.178947
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 11
End posion on genome 89
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acccataaaa
tRNA gene sequence 
GTCCTATTAGCTCAGTCCGGTTAGTAGCAGTTCGCTCATAACGAAAAGGTCACAGGTTCG
AATCCTGTATAGGACACAA
Downstream region at tRNA end position 
aacctccaag
Secondary structure (Cloverleaf model)
>SRA1001414	Met	CAT
                   a      ACAA aacctccaag
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     A - T
                     T - A          T A
                    T     T G T C C     A
    C T G A        A      | | | | |     G
  C         C T C G       A C A G G     C
  G           | | |                 T T
  G         T A G C
    T T A G        A     AGGTC
                    G   A
                    T - A
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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