The detailed information of tRNA gene sequence


Sequence ID>SRA1001416
Genome IDSRR001064.187963
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 9
End posion on genome 84
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nntaaaatta
tRNA gene sequence 
CTAGGTGTAGGAAAGTTGGTATTCCGCGTGCTTTGGGAGCACGAGATCGCAGGTTCGAGC
CCTGTCACTTAGACTA
Downstream region at tRNA end position 
aaaggagtag
Secondary structure (Cloverleaf model)
>SRA1001416	Pro	TGG
                   a      ACTA aaaggagtag
                     C - G
                     T - A
                     A - T
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    T       A A G G       G C A G G     C
    G       | | | |                 T T
    G       T T C C
      T A          G     AGATC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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