The detailed information of tRNA gene sequence


Sequence ID>SRA1001424
Genome IDSRR001064.252846
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 90
End posion on genome 1
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttattaaac
tRNA gene sequence 
AGAGAGGTGTCCGAGTGGTTGAAGGAGCACACCTGGAAAGTGTGTATACGGGAAACCGTA
TCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001424	Ser	GGA
                   c      GCAA nnnnnnnnnn
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    A - T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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