The detailed information of tRNA gene sequence


Sequence ID>SRA1001426
Genome IDSRR001064.261126
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 74
End posion on genome 1
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaaaaatta
tRNA gene sequence 
GGGTGATTAGACTCAGTTGGTAGAGCGCTGCCTTCACACGGCAGAGGTCACTGGTTCGAG
TCCAGTATCACCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001426	Val	CAC
                   a      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      G A C        A      | | | | |     G
    T       T C A G       A C T G G     C
    T       +     |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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