The detailed information of tRNA gene sequence


Sequence ID>SRA1001427
Genome IDSRR001064.264513
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 98
End posion on genome 22
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgggttgtt
tRNA gene sequence 
GGATTGGTAGTTCAGTTGGTTAGAATGCTGCCCTGTCACGGCAGAGGTCGCGGGTTCGAG
TCCCGTCCAGTCCGCAA
Downstream region at tRNA end position 
aaagcctcaa
Secondary structure (Cloverleaf model)
>SRA1001427	Asp	GTC
                   t      GCAA aaagcctcaa
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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