The detailed information of tRNA gene sequence


Sequence ID>SRA1001432
Genome IDSRR001064.283727
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 95
End posion on genome 24
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catatattac
tRNA gene sequence 
AGCGGGTTAGCTCAGAGGTGGAGTGTTGGGCTCATAACCCAAAGGTCGAAGGTTCGATCC
CTTCATCCGCTAata
Downstream region at tRNA end position 
attattttaa
Secondary structure (Cloverleaf model)
>SRA1001432	Met	CAT
                   c      Aata attattttaa
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A          C T
                    T     C T T C C     A
        G A        A      | | | | |     G
      A     C T C G       G A A G G     C
      G     | | | +                 T T
      G     G A G T
        T G        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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