The detailed information of tRNA gene sequence


Sequence ID>SRA1001435
Genome IDSRR001064.298793
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 106
End posion on genome 32
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aattgtttta
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTAGCGCACGTCGTTCGGGACGACGGGGCCGCTGGTTCGAA
TCCAGTCATCCCGACtt
Downstream region at tRNA end position 
gacaggacaa
Secondary structure (Cloverleaf model)
>SRA1001435	Pro	CGG
                   a      ACtt gacaggacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    G - C
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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