The detailed information of tRNA gene sequence


Sequence ID>SRA1001439
Genome IDSRR001064.321299
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 91
End posion on genome 15
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tctttcggtt
tRNA gene sequence 
CGGAGTGTGGCGCAGCCTGGTAGCGCATCTGCATGGGGTGCAGAGGGTCGAAGGTTCGAA
TCCTTTCACTCCGACCA
Downstream region at tRNA end position 
agttttgatg
Secondary structure (Cloverleaf model)
>SRA1001439	Pro	GGG
                   t      ACCA agttttgatg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G A A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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