The detailed information of tRNA gene sequence


Sequence ID>SRA1001441
Genome IDSRR001064.330770
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 87
End posion on genome 12
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttcgccacgt
tRNA gene sequence 
CGGGGGGTAGCTCAGCTGGGAGAGCGCCGCGTTCGCAATGCGGAGGTCGGGAGTTCGATC
CTCCTCCTCTCCACCA
Downstream region at tRNA end position 
ccaaacgcca
Secondary structure (Cloverleaf model)
>SRA1001441	Ala	CGC
                   t      ACCA ccaaacgcca
                     C   C
                     G - C
                     G + T
                     G - C
                     G + T
                     G - C
                     G - C          C T
                    T     T C C T C     A
      C G A        A      + | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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