The detailed information of tRNA gene sequence


Sequence ID>SRA1001442
Genome IDSRR001064.335907
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 27
End posion on genome 102
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tttaaccatT
tRNA gene sequence 
GCGGCCGTAGCTCAGGTGGATAGAGCGAGCGCCTCCTAAGCACTAGGTCACAGGTTCAAC
TCCTGTCGGTCGCAAnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001442	Arg	CCT
                   T      AAnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C          T C
                    T     T G T C C     A
      G G A        A      | | | | |     A
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGTC
                    A - T
                    G - C
                    C   A
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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